January in Flagstaff is the snowiest and the coldest month of the year. In January, the weather in Flagstaff is typically cold. Average daily high temperature in January is about 5 degrees above zero. On average, Flagstaff has 15 sunny, 8 partly cloudy, 5 cloudy, 2 snowy, and 1 rainy day in January. The snowfalls are usually moderate. January as well as February, March, July, and August is considered the most uncomfortable time to visit Flagstaff.